STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GABREGamma-aminobutyric acid type A receptor epsilon subunit. (492 aa)    
Predicted Functional Partners:
GABRB3
Gamma-aminobutyric acid type A receptor beta3 subunit.
  
 
0.956
GABRB2
Gamma-aminobutyric acid type A receptor beta2 subunit.
  
 
0.940
ENSCAPP00000017223
annotation not available
  
 
0.936
GABBR2
Gamma-aminobutyric acid type B receptor subunit 2.
    
 0.922
GABBR1
Gamma-aminobutyric acid type B receptor subunit 1.
    
 0.918
GABRA1
Gamma-aminobutyric acid type A receptor alpha1 subunit.
  
  
 
0.917
GABRA2
Gamma-aminobutyric acid type A receptor alpha2 subunit.
  
  
0.916
GABARAPL2
GABA type A receptor associated protein like 2.
    
  0.897
ENSCAPP00000017351
annotation not available
    
  0.897
GABRG2
Gamma-aminobutyric acid type A receptor gamma2 subunit.
  
  
 
0.883
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.