STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTCH2Mitochondrial carrier 2. (271 aa)    
Predicted Functional Partners:
NDUFB9
NADH:ubiquinone oxidoreductase subunit B9.
   
 
 0.858
NDUFB5
NADH:ubiquinone oxidoreductase subunit B5.
   
   0.829
ENSCAPP00000005053
annotation not available
   
   0.800
NDUFS1
NADH:ubiquinone oxidoreductase core subunit S1.
   
 
 0.750
NDUFA12
NADH:ubiquinone oxidoreductase subunit A12.
   
 
 0.729
ALKBH3
alkB homolog 3, alpha-ketoglutaratedependent dioxygenase.
   
  
 0.706
GNPDA2
Glucosamine-6-phosphate deaminase 2.
      
 0.690
TMEM18
Transmembrane protein 18.
      
 0.688
NEGR1
Neuronal growth regulator 1.
   
  
 0.683
PLIN3
Perilipin 3.
    
 
 0.675
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.