Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
USP7Ubiquitin specific peptidase 7. (989 aa)    
Predicted Functional Partners:
UVSSA
UV stimulated scaffold protein A.
    
 0.998
TP53
Tumor protein p53.
    
 0.998
DAXX
Death domain associated protein.
    
 0.997
USP11
Ubiquitin specific peptidase 11.
   
 0.993
ENSCAPP00000016912
annotation not available
   
 0.991
ENSCAPP00000007186
annotation not available
    
 0.988
MDM4
MDM4 regulator of p53.
    
 0.982
ENSCAPP00000010800
annotation not available
   
 0.982
GMPS
Guanine monophosphate synthase.
   
 
 0.981
TRAF6
TNF receptor associated factor 6.
    
 0.977
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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