STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPIL2Peptidylprolyl isomerase like 2. (447 aa)    
Predicted Functional Partners:
ENSCAPP00000006491
annotation not available
   
  0.974
DHX38
DEAH-box helicase 38.
   
 0.969
CWC25
CWC25 spliceosome associated protein homolog.
   
 0.960
CCDC12
Coiled-coil domain containing 12.
    
  0.942
SYF2
SYF2 pre-mRNA splicing factor.
    
 0.940
ENSCAPP00000014011
annotation not available
   
 0.940
BSG
Basigin (Ok blood group).
    
 0.939
MTREX
Mtr4 exosome RNA helicase.
   
  0.933
WDR70
WD repeat domain 70.
   
  0.932
PPWD1
Peptidylprolyl isomerase domain and WD repeat containing 1.
    
 0.931
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.