STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCNAB2Potassium voltage-gated channel subfamily A regulatory beta subunit 2. (382 aa)    
Predicted Functional Partners:
KCNA2
Potassium voltage-gated channel subfamily A member 2.
   
 0.980
KCNA5
Potassium voltage-gated channel subfamily A member 5.
   
 0.933
KCNA4
Potassium voltage-gated channel subfamily A member 4.
   
 0.915
KCNA10
Potassium voltage-gated channel subfamily A member 10.
   
 0.907
ENSCAPP00000011178
annotation not available
   
 0.847
NUP107
Nucleoporin 107.
    
 0.828
SEH1L
SEH1 like nucleoporin.
    
 0.807
SEC13
SEC13 homolog, nuclear pore and COPII coat complex component.
    
 0.806
KCNF1
Potassium voltage-gated channel modifier subfamily F member 1.
    
 0.805
HAO1
Hydroxyacid oxidase 1.
   
 
 0.797
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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