Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RBL1RB transcriptional corepressor like 1. (729 aa)    
Predicted Functional Partners:
CDK2
Cyclin dependent kinase 2.
   
 0.997
E2F1
E2F transcription factor 1.
   
 0.996
TFDP2
Transcription factor Dp-2.
   
 0.995
ENSCAPP00000014263
annotation not available
   
 0.992
CDK4
Cyclin dependent kinase 4.
   
 0.992
TFDP1
Transcription factor Dp-1.
   
 0.990
ENSCAPP00000015542
annotation not available
   
 0.990
LIN9
Lin-9 DREAM MuvB core complex component.
   
 0.988
CCNA2
Cyclin A2.
   
 0.987
LIN37
Lin-37 DREAM MuvB core complex component.
    
 0.985
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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