STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000002906annotation not available (820 aa)    
Predicted Functional Partners:
ATG13
Autophagy related 13.
    
 0.994
ULK1
Unc-51 like autophagy activating kinase 1.
   
 0.974
ENSCAPP00000013876
annotation not available
   
   0.960
ATG2A
Autophagy related 2A.
   
 0.956
ATG16L1
Autophagy related 16 like 1.
    
 
 0.939
ULK2
Unc-51 like autophagy activating kinase 2.
   
 0.938
WIPI2
WD repeat domain, phosphoinositide interacting 2.
   
 0.936
ATG2B
Autophagy related 2B.
   
 0.934
WIPI1
WD repeat domain, phosphoinositide interacting 1.
   
 0.931
ENSCAPP00000005383
annotation not available
    
 0.926
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.