Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000002923annotation not available (160 aa)    
Predicted Functional Partners:
TBK1
TANK binding kinase 1.
    
 0.997
GABARAPL2
GABA type A receptor associated protein like 2.
   
 0.995
ENSCAPP00000010142
annotation not available
   
 0.992
TAX1BP1
Tax1 binding protein 1.
    
 0.982
IKBKE
Inhibitor of nuclear factor kappa B kinase subunit epsilon.
    
 0.980
ENSCAPP00000017351
annotation not available
   
 0.978
ENSCAPP00000005006
annotation not available
   
 0.977
ENSCAPP00000015096
annotation not available
    
 0.976
SQSTM1
Sequestosome 1.
    
 0.969
AZI2
5-azacytidine induced 2.
    
 
 0.961
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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