Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BFSP1Beaded filament structural protein 1. (703 aa)    
Predicted Functional Partners:
BFSP2
Beaded filament structural protein 2.
    
 
 0.953
CRYGS
Crystallin gamma S.
      
 0.928
CRYBA1
Crystallin beta A1.
   
  
 0.918
ENSCAPP00000005881
annotation not available
      
 0.902
CRYBA4
Crystallin beta A4.
      
 0.900
CRYBB1
Crystallin beta B1.
      
 0.879
SYNM
Synemin.
    
 
 0.821
GALK1
Galactokinase 1.
      
 0.743
ENSCAPP00000001225
annotation not available
      
 0.715
PPL
Periplakin.
    
 
 0.709
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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