Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000002944annotation not available (64 aa)    
Predicted Functional Partners:
SPACA9
Sperm acrosome associated 9.
    
 
 0.914
FAM166A
Family with sequence similarity 166 member A.
   
 
 0.888
TEKT3
Tektin 3.
   
 
 0.887
C9orf116
Chromosome 9 open reading frame 116.
    
 
 0.788
EFCAB6
EF-hand calcium binding domain 6.
   
 0.773
THEG
Theg spermatid protein.
    
 
 0.768
TEKT5
Tektin 5.
   
 
 0.758
ENSCAPP00000004666
annotation not available
   
 0.744
ENSCAPP00000015276
annotation not available
   
 0.744
ENSCAPP00000013812
annotation not available
   
 
 0.742
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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