Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000002948annotation not available (129 aa)    
Predicted Functional Partners:
NDUFAF1
NADH:ubiquinone oxidoreductase complex assembly factor 1.
    
 0.964
ENSCAPP00000016484
annotation not available
     
 0.961
LCLAT1
Lysocardiolipin acyltransferase 1.
   
 
 0.958
BTRC
Beta-transducin repeat containing E3 ubiquitin protein ligase.
    
   0.958
LATS1
Large tumor suppressor kinase 1.
    
 
 0.895
FBXW11
F-box and WD repeat domain containing 11.
    
   0.828
ENSCAPP00000009147
annotation not available
   
   0.811
PUM2
Pumilio RNA binding family member 2.
   
   0.811
HDHD5
Haloacid dehalogenase like hydrolase domain containing 5.
     
  0.798
TEAD1
TEA domain transcription factor 1.
    
 
 0.798
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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