Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GLTPGlycolipid transfer protein. (178 aa)    
Predicted Functional Partners:
SHKBP1
SH3KBP1 binding protein 1.
    
   0.840
ENSCAPP00000008370
annotation not available
    
   0.827
CMTM5
CKLF like MARVEL transmembrane domain containing 5.
    
   0.806
ETFB
Electron transfer flavoprotein subunit beta.
    
   0.700
PLEKHA3
Pleckstrin homology domain containing A3.
      
 0.691
RFLNA
Refilin A.
      
 0.633
ANKRD13A
Ankyrin repeat domain 13A.
   
  
 0.617
KCTD3
Potassium channel tetramerization domain containing 3.
    
   0.593
UGCG
UDP-glucose ceramide glucosyltransferase.
      
 0.584
PPP4R4
Protein phosphatase 4 regulatory subunit 4.
   
  
 0.578
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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