STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000002951annotation not available (144 aa)    
Predicted Functional Partners:
ENSCAPP00000000576
annotation not available
   
  0.993
ENSCAPP00000004781
annotation not available
   
  0.993
ENSCAPP00000006028
annotation not available
  
 0.984
RPS18
Ribosomal protein S18.
  
 0.984
ENSCAPP00000016878
annotation not available
  
 0.981
RPS9
Ribosomal protein S9.
  
 0.979
RSAD1
Radical S-adenosyl methionine domain containing 1.
  
 0.975
RPS5
Ribosomal protein S5.
  
 0.971
EIF2S2
Eukaryotic translation initiation factor 2 subunit beta.
   
 0.966
EIF2S1
Eukaryotic translation initiation factor 2 subunit alpha.
   
 0.966
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.