Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ATP9BATPase phospholipid transporting 9B (putative). (1003 aa)    
Predicted Functional Partners:
ENSCAPP00000017751
annotation not available
   
 
 0.764
DNAI2
Dynein axonemal intermediate chain 2.
   
 
 0.759
ENSCAPP00000006095
annotation not available
    
 
 0.738
DNAI1
Dynein axonemal intermediate chain 1.
   
 
 0.731
DRC1
Dynein regulatory complex subunit 1.
   
 
 0.727
CCDC65
Coiled-coil domain containing 65.
   
 
 0.721
WDR63
WD repeat domain 63.
   
 
 0.625
ENSCAPP00000011153
annotation not available
   
 
 0.625
LSM2
LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated.
    
   0.580
RETREG3
Reticulophagy regulator family member 3.
    
   0.571
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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