Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CPN1Carboxypeptidase N subunit 1. (394 aa)    
Predicted Functional Partners:
LRRC15
Leucine rich repeat containing 15.
   
 0.970
CPB2
Carboxypeptidase B2.
   
 
 0.859
CPD
Carboxypeptidase D.
    
   0.849
C5
Complement C5.
   
 0.836
CPB1
Carboxypeptidase B1.
   
 
 0.801
HABP2
Hyaluronan binding protein 2.
   
 
 0.738
IGFALS
Insulin like growth factor binding protein acid labile subunit.
   
 
 0.735
SEMA4G
Semaphorin 4G.
      
 0.689
NAV1
Neuron navigator 1.
     
 0.676
ENSCAPP00000010667
annotation not available
   
  
 0.667
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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