close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATG4BAutophagy related 4B cysteine peptidase. (401 aa)    
Predicted Functional Partners:
GABARAPL2
GABA type A receptor associated protein like 2.
   
 0.987
ENSCAPP00000017351
annotation not available
   
 0.986
ENSCAPP00000010142
annotation not available
   
 0.984
ULK2
Unc-51 like autophagy activating kinase 2.
   
 
 0.907
ULK1
Unc-51 like autophagy activating kinase 1.
   
 
 0.907
ATG4C
Autophagy related 4C cysteine peptidase.
     
0.817
ATG3
Autophagy related 3.
   
 
 0.804
ATG7
Autophagy related 7.
   
 
 0.745
ENSCAPP00000002553
annotation not available
   
 
 0.722
PDIK1L
PDLIM1 interacting kinase 1 like.
   
 
 0.722
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.