STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPL3Ribosomal protein L3. (345 aa)    
Predicted Functional Partners:
RPL8
Ribosomal protein L8.
  
 0.999
ENSCAPP00000004779
annotation not available
   
 0.999
RPL13A
Ribosomal protein L13a.
  
 0.999
RPL14
Ribosomal protein L14.
  
 0.999
RPL19
Ribosomal protein L19.
  
 0.999
RPL32
Ribosomal protein L32.
  
 0.999
RPL30
Ribosomal protein L30.
  
 0.999
RPL5
Ribosomal protein L5.
  
 0.999
RPL4
Ribosomal protein L4.
  
 0.999
ENSCAPP00000017536
annotation not available
  
 0.999
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.