Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PPP1R7Protein phosphatase 1 regulatory subunit 7. (307 aa)    
Predicted Functional Partners:
PPP1R11
Protein phosphatase 1 regulatory inhibitor subunit 11.
   
 0.992
PPP1CB
Protein phosphatase 1 catalytic subunit beta.
   
 0.985
UBXN2B
UBX domain protein 2B.
   
 
 0.969
PPP1R16B
Protein phosphatase 1 regulatory subunit 16B.
    
 0.962
ENSCAPP00000000802
annotation not available
   
 0.960
PPP1CA
Protein phosphatase 1 catalytic subunit alpha.
   
 0.960
SH2D4A
SH2 domain containing 4A.
    
   0.958
ENSCAPP00000008315
annotation not available
   
 
 0.951
VCP
Valosin containing protein.
    
 
 0.942
PPP1R3A
Protein phosphatase 1 regulatory subunit 3A.
    
 0.909
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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