Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PPP1R3BProtein phosphatase 1 regulatory subunit 3B. (282 aa)    
Predicted Functional Partners:
GYS1
Glycogen synthase 1.
   
 0.993
GYG1
Glycogenin 1.
   
 0.990
GYS2
Glycogen synthase 2.
   
 0.988
PPP1R3A
Protein phosphatase 1 regulatory subunit 3A.
     
 0.984
PPP1CA
Protein phosphatase 1 catalytic subunit alpha.
    
 0.982
ENSCAPP00000000802
annotation not available
    
 0.977
PPP1CB
Protein phosphatase 1 catalytic subunit beta.
    
 0.970
PPP1R10
Protein phosphatase 1 regulatory subunit 10.
    
  0.952
PHKG1
Phosphorylase kinase catalytic subunit gamma 1.
     
 0.932
EPM2A
EPM2A glucan phosphatase, laforin.
   
 0.926
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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