Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZMYM5Zinc finger MYM-type containing 5. (330 aa)    
Predicted Functional Partners:
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.787
DNAJC12
DnaJ heat shock protein family (Hsp40) member C12.
    
 
 0.662
RBMS3
RNA binding motif single stranded interacting protein 3.
      
 0.639
RIPOR1
RHO family interacting cell polarization regulator 1.
    
 0.637
ENSCAPP00000008331
annotation not available
   
 
 0.611
PARD3B
Par-3 family cell polarity regulator beta.
    
 0.606
ENSCAPP00000004791
annotation not available
    
 
 0.601
PSKH1
Protein serine kinase H1.
    
 0.583
SUMO1
Small ubiquitin like modifier 1.
    
  0.570
ENSCAPP00000000270
annotation not available
   
 0.548
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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