STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MITD1Microtubule interacting and trafficking domain containing 1. (191 aa)    
Predicted Functional Partners:
CHMP1A
Charged multivesicular body protein 1A.
    
 
 0.931
TMEM121
Transmembrane protein 121.
      
 0.565
PGLYRP1
Peptidoglycan recognition protein 1.
      
 0.564
ENSCAPP00000004061
annotation not available
      
 0.547
ENSCAPP00000002788
annotation not available
      
 0.545
ENSCAPP00000016527
annotation not available
      
 0.539
ENSCAPP00000001476
annotation not available
      
 0.538
ENSCAPP00000007435
annotation not available
      
 0.430
ENSCAPP00000006357
annotation not available
      
 0.422
ENSCAPP00000014228
annotation not available
      
 0.420
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.