Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000003023annotation not available (74 aa)    
Predicted Functional Partners:
ENSCAPP00000005766
annotation not available
    
 0.973
RAB11FIP4
RAB11 family interacting protein 4.
      
 0.686
FREM3
FRAS1 related extracellular matrix 3.
      
 0.685
CCKAR
Cholecystokinin A receptor.
     
 0.678
CYSLTR1
Cysteinyl leukotriene receptor 1.
     
 0.677
CYSLTR2
Cysteinyl leukotriene receptor 2.
     
 0.665
QRFP
Pyroglutamylated RFamide peptide.
     
 0.659
MYO9A
Myosin IXA.
      
 0.604
SMURF1
SMAD specific E3 ubiquitin protein ligase 1.
      
 0.594
LAMP5
Lysosomal associated membrane protein family member 5.
      
 0.570
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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