HNF1B protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

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Gene Fusion

Co-occurrence

Co-expression

Experiments

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[Homology]

Score

HNF1B

HNF1 homeobox B. (458 aa)

Predicted Functional Partners:

ENSCAPP00000007770

0.940

PCBD1

0.935

CREBBP

0.788

HNF4A

0.772

ENSCAPP00000011650

0.711

HNF4G

0.686

ENSCAPP00000007440

0.619

ENSCAPP00000011888

0.619

ENSCAPP00000005321

0.617

EP300

0.607

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CREBBP	ENSCAPP00000007440	ENSCAPP00000004072	ENSCAPP00000007440	CREB binding protein.	annotation not available	0.994
CREBBP	ENSCAPP00000011888	ENSCAPP00000004072	ENSCAPP00000011888	CREB binding protein.	annotation not available	0.994
CREBBP	EP300	ENSCAPP00000004072	ENSCAPP00000017514	CREB binding protein.	E1A binding protein p300.	0.999
CREBBP	HNF1B	ENSCAPP00000004072	ENSCAPP00000003024	CREB binding protein.	HNF1 homeobox B.	0.788
CREBBP	HNF4A	ENSCAPP00000004072	ENSCAPP00000014955	CREB binding protein.	Hepatocyte nuclear factor 4 alpha.	0.964
CREBBP	HNF4G	ENSCAPP00000004072	ENSCAPP00000017033	CREB binding protein.	Hepatocyte nuclear factor 4 gamma.	0.865
ENSCAPP00000005321	HNF1B	ENSCAPP00000005321	ENSCAPP00000003024	annotation not available	HNF1 homeobox B.	0.617
ENSCAPP00000007440	CREBBP	ENSCAPP00000007440	ENSCAPP00000004072	annotation not available	CREB binding protein.	0.994
ENSCAPP00000007440	ENSCAPP00000011888	ENSCAPP00000007440	ENSCAPP00000011888	annotation not available	annotation not available	0.919
ENSCAPP00000007440	EP300	ENSCAPP00000007440	ENSCAPP00000017514	annotation not available	E1A binding protein p300.	0.995
ENSCAPP00000007440	HNF1B	ENSCAPP00000007440	ENSCAPP00000003024	annotation not available	HNF1 homeobox B.	0.619
ENSCAPP00000007770	HNF1B	ENSCAPP00000007770	ENSCAPP00000003024	annotation not available	HNF1 homeobox B.	0.940
ENSCAPP00000007770	PCBD1	ENSCAPP00000007770	ENSCAPP00000013124	annotation not available	Pterin-4 alpha-carbinolamine dehydratase 1.	0.985
ENSCAPP00000011650	HNF1B	ENSCAPP00000011650	ENSCAPP00000003024	annotation not available	HNF1 homeobox B.	0.711
ENSCAPP00000011650	HNF4A	ENSCAPP00000011650	ENSCAPP00000014955	annotation not available	Hepatocyte nuclear factor 4 alpha.	0.415
ENSCAPP00000011888	CREBBP	ENSCAPP00000011888	ENSCAPP00000004072	annotation not available	CREB binding protein.	0.994
ENSCAPP00000011888	ENSCAPP00000007440	ENSCAPP00000011888	ENSCAPP00000007440	annotation not available	annotation not available	0.919
ENSCAPP00000011888	EP300	ENSCAPP00000011888	ENSCAPP00000017514	annotation not available	E1A binding protein p300.	0.995
ENSCAPP00000011888	HNF1B	ENSCAPP00000011888	ENSCAPP00000003024	annotation not available	HNF1 homeobox B.	0.619
EP300	CREBBP	ENSCAPP00000017514	ENSCAPP00000004072	E1A binding protein p300.	CREB binding protein.	0.999