Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CDH10Cadherin 10. (436 aa)    
Predicted Functional Partners:
CTNNB1
Catenin beta 1.
    
 0.989
CDH9
Cadherin 9.
   
 
  0.975
JUP
Junction plakoglobin.
    
 0.959
CDH18
Cadherin 18.
   
 0.958
ENSCAPP00000012377
annotation not available
   
 
  0.953
CTNND1
Catenin delta 1.
    
 0.951
ENSCAPP00000014083
annotation not available
     
 0.950
CDH20
Cadherin 20.
   
 
  0.948
CDH6
Cadherin 6.
   
 
  0.948
CDH12
Cadherin 12.
   
 
  0.948
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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