Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MTMR11Myotubularin related protein 11. (466 aa)    
Predicted Functional Partners:
ENSCAPP00000017834
annotation not available
      
 0.583
PIK3C3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 0.574
VPS45
Vacuolar protein sorting 45 homolog.
      
 0.572
PIKFYVE
Phosphoinositide kinase, FYVE-type zinc finger containing.
     
 0.570
ENSCAPP00000001438
annotation not available
     
 0.522
PI4KA
Phosphatidylinositol 4-kinase alpha.
     
 0.516
MTMR2
Myotubularin related protein 2.
    
  0.511
ENSCAPP00000005239
annotation not available
    
  0.511
MTM1
Myotubularin 1.
    
  0.511
MTMR4
Myotubularin related protein 4.
    
  0.511
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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