Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CPXM1Carboxypeptidase X, M14 family member 1. (719 aa)    
Predicted Functional Partners:
TARS1
threonyl-tRNA synthetase 1.
      
 0.770
TPD52
Tumor protein D52.
     
 0.594
ENSCAPP00000016307
annotation not available
     
 0.577
GDAP1L1
Ganglioside induced differentiation associated protein 1 like 1.
      
 0.570
ENSCAPP00000017052
annotation not available
      
 0.570
ZBTB46
Zinc finger and BTB domain containing 46.
      
 0.569
LRRC17
Leucine rich repeat containing 17.
   
 
 0.569
ENSCAPP00000015412
annotation not available
      
 0.568
POLR3H
RNA polymerase III subunit H.
    
 0.566
AGL
Amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase.
      
 0.560
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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