TXNL1 protein (Cavia aperea) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

TXNL1

Thioredoxin like 1. (242 aa)

Predicted Functional Partners:

ENSCAPP00000016835

0.983

ENSCAPP00000014603

0.957

PSMD4

0.955

PSMD7

0.947

PSMD1

0.923

PSMC2

0.920

PSMD12

0.920

PSMC6

0.908

PSMD2

0.907

RAD23A

0.903

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCAPP00000014603	ENSCAPP00000016835	ENSCAPP00000014603	ENSCAPP00000016835	annotation not available	annotation not available	0.999
ENSCAPP00000014603	PSMC2	ENSCAPP00000014603	ENSCAPP00000003383	annotation not available	Proteasome 26S subunit, ATPase 2.	0.999
ENSCAPP00000014603	PSMC6	ENSCAPP00000014603	ENSCAPP00000003327	annotation not available	Proteasome 26S subunit, ATPase 6.	0.999
ENSCAPP00000014603	PSMD1	ENSCAPP00000014603	ENSCAPP00000001110	annotation not available	Proteasome 26S subunit, non-ATPase 1.	0.999
ENSCAPP00000014603	PSMD12	ENSCAPP00000014603	ENSCAPP00000016144	annotation not available	Proteasome 26S subunit, non-ATPase 12.	0.999
ENSCAPP00000014603	PSMD2	ENSCAPP00000014603	ENSCAPP00000011143	annotation not available	Proteasome 26S subunit, non-ATPase 2.	0.999
ENSCAPP00000014603	PSMD4	ENSCAPP00000014603	ENSCAPP00000009665	annotation not available	Proteasome 26S subunit, non-ATPase 4.	0.999
ENSCAPP00000014603	PSMD7	ENSCAPP00000014603	ENSCAPP00000009236	annotation not available	Proteasome 26S subunit, non-ATPase 7.	0.999
ENSCAPP00000014603	RAD23A	ENSCAPP00000014603	ENSCAPP00000015089	annotation not available	RAD23 homolog A, nucleotide excision repair protein.	0.967
ENSCAPP00000014603	TXNL1	ENSCAPP00000014603	ENSCAPP00000003048	annotation not available	Thioredoxin like 1.	0.957
ENSCAPP00000016835	ENSCAPP00000014603	ENSCAPP00000016835	ENSCAPP00000014603	annotation not available	annotation not available	0.999
ENSCAPP00000016835	PSMC2	ENSCAPP00000016835	ENSCAPP00000003383	annotation not available	Proteasome 26S subunit, ATPase 2.	0.999
ENSCAPP00000016835	PSMC6	ENSCAPP00000016835	ENSCAPP00000003327	annotation not available	Proteasome 26S subunit, ATPase 6.	0.999
ENSCAPP00000016835	PSMD1	ENSCAPP00000016835	ENSCAPP00000001110	annotation not available	Proteasome 26S subunit, non-ATPase 1.	0.999
ENSCAPP00000016835	PSMD12	ENSCAPP00000016835	ENSCAPP00000016144	annotation not available	Proteasome 26S subunit, non-ATPase 12.	0.999
ENSCAPP00000016835	PSMD2	ENSCAPP00000016835	ENSCAPP00000011143	annotation not available	Proteasome 26S subunit, non-ATPase 2.	0.999
ENSCAPP00000016835	PSMD4	ENSCAPP00000016835	ENSCAPP00000009665	annotation not available	Proteasome 26S subunit, non-ATPase 4.	0.999
ENSCAPP00000016835	PSMD7	ENSCAPP00000016835	ENSCAPP00000009236	annotation not available	Proteasome 26S subunit, non-ATPase 7.	0.999
ENSCAPP00000016835	RAD23A	ENSCAPP00000016835	ENSCAPP00000015089	annotation not available	RAD23 homolog A, nucleotide excision repair protein.	0.975
ENSCAPP00000016835	TXNL1	ENSCAPP00000016835	ENSCAPP00000003048	annotation not available	Thioredoxin like 1.	0.983