STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TXNL1Thioredoxin like 1. (242 aa)    
Predicted Functional Partners:
ENSCAPP00000016835
annotation not available
   
 
 0.967
ENSCAPP00000014603
annotation not available
   
   0.707
MYSM1
Myb like, SWIRM and MPN domains 1.
   
 
 0.696
MPND
MPN domain containing.
   
 
 0.691
PSMC6
Proteasome 26S subunit, ATPase 6.
   
   0.681
CLTC
Clathrin heavy chain.
   
 
  0.673
COPS6
COP9 signalosome subunit 6.
   
 
 0.672
PSMD4
Proteasome 26S subunit, non-ATPase 4.
   
 
 0.671
PSMD12
Proteasome 26S subunit, non-ATPase 12.
   
 
 0.664
PSMD7
Proteasome 26S subunit, non-ATPase 7.
   
 
 0.663
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.