STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM6SF2Transmembrane 6 superfamily member 2. (350 aa)    
Predicted Functional Partners:
DHX9
DExH-box helicase 9.
    
  0.706
RBM17
RNA binding motif protein 17.
    
 
 0.697
DQX1
DEAQ-box RNA dependent ATPase 1.
   
 0.687
DHX32
DEAH-box helicase 32 (putative).
   
 0.687
DHX15
DEAH-box helicase 15.
    
 0.678
U2AF2
U2 small nuclear RNA auxiliary factor 2.
    
 
 0.665
RBM25
RNA binding motif protein 25.
   
 
 0.582
ENSCAPP00000009186
annotation not available
      
 0.552
PNPLA2
Patatin like phospholipase domain containing 2.
      
 0.546
PRR3
Proline rich 3.
    
 0.543
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.