Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TM6SF2Transmembrane 6 superfamily member 2. (350 aa)    
Predicted Functional Partners:
U2AF2
U2 small nuclear RNA auxiliary factor 2.
    
 0.777
ENSCAPP00000009186
annotation not available
      
 0.758
PNPLA2
Patatin like phospholipase domain containing 2.
      
 0.721
RBM17
RNA binding motif protein 17.
    
 
 0.713
HSD17B13
Hydroxysteroid 17-beta dehydrogenase 13.
      
 0.687
ENSCAPP00000014899
annotation not available
     
 0.665
ENSCAPP00000005433
annotation not available
     
  0.648
DQX1
DEAQ-box RNA dependent ATPase 1.
    
 0.624
DHX15
DEAH-box helicase 15.
    
 0.624
DHX32
DEAH-box helicase 32 (putative).
    
 0.624
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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