ENSCAPP00000003052 protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

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[Homology]

Score

ENSCAPP00000003052

annotation not available (137 aa)

Predicted Functional Partners:

RPL8

0.996

RPL5

0.996

ENSCAPP00000004779

0.995

ENSCAPP00000012651

0.995

ENSCAPP00000014714

0.995

ENSCAPP00000000576

0.994

ENSCAPP00000004658

0.994

ENSCAPP00000004781

0.994

RPL19

0.994

RPL30

0.994

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCAPP00000000576	ENSCAPP00000003052	ENSCAPP00000000576	ENSCAPP00000003052	annotation not available	annotation not available	0.994
ENSCAPP00000000576	ENSCAPP00000004658	ENSCAPP00000000576	ENSCAPP00000004658	annotation not available	annotation not available	0.998
ENSCAPP00000000576	ENSCAPP00000004779	ENSCAPP00000000576	ENSCAPP00000004779	annotation not available	annotation not available	0.998
ENSCAPP00000000576	ENSCAPP00000004781	ENSCAPP00000000576	ENSCAPP00000004781	annotation not available	annotation not available	0.990
ENSCAPP00000000576	ENSCAPP00000012651	ENSCAPP00000000576	ENSCAPP00000012651	annotation not available	annotation not available	0.999
ENSCAPP00000000576	ENSCAPP00000014714	ENSCAPP00000000576	ENSCAPP00000014714	annotation not available	annotation not available	0.998
ENSCAPP00000000576	RPL19	ENSCAPP00000000576	ENSCAPP00000009304	annotation not available	Ribosomal protein L19.	0.999
ENSCAPP00000000576	RPL30	ENSCAPP00000000576	ENSCAPP00000012081	annotation not available	Ribosomal protein L30.	0.998
ENSCAPP00000000576	RPL5	ENSCAPP00000000576	ENSCAPP00000013511	annotation not available	Ribosomal protein L5.	0.998
ENSCAPP00000000576	RPL8	ENSCAPP00000000576	ENSCAPP00000003457	annotation not available	Ribosomal protein L8.	0.998
ENSCAPP00000003052	ENSCAPP00000000576	ENSCAPP00000003052	ENSCAPP00000000576	annotation not available	annotation not available	0.994
ENSCAPP00000003052	ENSCAPP00000004658	ENSCAPP00000003052	ENSCAPP00000004658	annotation not available	annotation not available	0.994
ENSCAPP00000003052	ENSCAPP00000004779	ENSCAPP00000003052	ENSCAPP00000004779	annotation not available	annotation not available	0.995
ENSCAPP00000003052	ENSCAPP00000004781	ENSCAPP00000003052	ENSCAPP00000004781	annotation not available	annotation not available	0.994
ENSCAPP00000003052	ENSCAPP00000012651	ENSCAPP00000003052	ENSCAPP00000012651	annotation not available	annotation not available	0.995
ENSCAPP00000003052	ENSCAPP00000014714	ENSCAPP00000003052	ENSCAPP00000014714	annotation not available	annotation not available	0.995
ENSCAPP00000003052	RPL19	ENSCAPP00000003052	ENSCAPP00000009304	annotation not available	Ribosomal protein L19.	0.994
ENSCAPP00000003052	RPL30	ENSCAPP00000003052	ENSCAPP00000012081	annotation not available	Ribosomal protein L30.	0.994
ENSCAPP00000003052	RPL5	ENSCAPP00000003052	ENSCAPP00000013511	annotation not available	Ribosomal protein L5.	0.996
ENSCAPP00000003052	RPL8	ENSCAPP00000003052	ENSCAPP00000003457	annotation not available	Ribosomal protein L8.	0.996