STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM49AFamily with sequence similarity 49 member A. (312 aa)    
Predicted Functional Partners:
ENSCAPP00000006843
annotation not available
      
 0.562
FAM49B
Family with sequence similarity 49 member B.
  
 
  
0.527
CELA1
Chymotrypsin like elastase 1.
      
 0.441
ENSCAPP00000002610
annotation not available
      
 0.428
RAC1
Rac family small GTPase 1.
    
 
 0.408
SPATS2L
Spermatogenesis associated serine rich 2 like.
      
 0.408
RAC2
Rac family small GTPase 2.
    
 
 0.408
RAC3
Rac family small GTPase 3.
    
 
 0.408
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.