Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FBXL13F-box and leucine rich repeat protein 13. (659 aa)    
Predicted Functional Partners:
SKP1
S-phase kinase associated protein 1.
    
 0.884
AK8
Adenylate kinase 8.
     
 0.837
CUL1
Cullin 1.
    
 0.836
RBX1
Ring-box 1.
    
 0.826
AK5
Adenylate kinase 5.
    
 0.777
CUL3
Cullin 3.
    
 0.752
RRM1
Ribonucleotide reductase catalytic subunit M1.
   
 
  0.718
AK7
Adenylate kinase 7.
     
  0.714
AK6
Adenylate kinase 6.
     
  0.714
TPK1
Thiamin pyrophosphokinase 1.
     
  0.714
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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