STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRMOtRNA methyltransferase O. (372 aa)    
Predicted Functional Partners:
ENSCAPP00000018027
annotation not available
    
  0.800
TYMS
Thymidylate synthetase.
    
  0.786
CDADC1
Cytidine and dCMP deaminase domain containing 1.
  
 
  0.588
DCTD
dCMP deaminase.
    
  0.574
ENSCAPP00000008888
annotation not available
    
  0.574
EPHX2
Epoxide hydrolase 2.
  
 
  0.571
NANP
N-acetylneuraminic acid phosphatase.
  
 
  0.549
ANKZF1
Ankyrin repeat and zinc finger peptidyl tRNA hydrolase 1.
      
 0.544
NME3
NME/NM23 nucleoside diphosphate kinase 3.
    
  0.542
ENSCAPP00000002543
annotation not available
    
  0.542
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.