Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000003079annotation not available (123 aa)    
Predicted Functional Partners:
ENSCAPP00000008032
annotation not available
    
 0.964
ENSCAPP00000004580
annotation not available
    
 0.951
CASP14
Caspase 14.
    
 0.814
CASP6
Caspase 6.
    
 0.796
CASP2
Caspase 2.
    
 0.753
ENSCAPP00000009599
annotation not available
     
 0.724
CASP9
Caspase 9.
    
 0.664
CASP10
Caspase 10.
    
 0.652
CASP8
Caspase 8.
    
 0.652
HMGB1
High mobility group box 1.
     
 0.645
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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