STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000003082annotation not available (1305 aa)    
Predicted Functional Partners:
RPS7
Ribosomal protein S7.
   
   0.960
RPL35
Ribosomal protein L35.
  
   0.940
ENSCAPP00000009223
annotation not available
   
   0.938
RACK1
Receptor for activated C kinase 1.
   
 
 0.938
RPS18
Ribosomal protein S18.
   
   0.938
EEF1G
Eukaryotic translation elongation factor 1 gamma.
   
 
 0.937
RPS5
Ribosomal protein S5.
   
   0.937
RPL31
Ribosomal protein L31.
   
 
 0.936
ENSCAPP00000016878
annotation not available
  
 
 0.936
RSAD1
Radical S-adenosyl methionine domain containing 1.
   
   0.928
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.