STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000003082annotation not available (1305 aa)    
Predicted Functional Partners:
RPL4
Ribosomal protein L4.
   
 
 0.966
ENSCAPP00000018483
annotation not available
   
   0.959
RPL5
Ribosomal protein L5.
   
 
 0.958
ENSCAPP00000004779
annotation not available
   
   0.948
RPL19
Ribosomal protein L19.
   
   0.947
RPL6
Ribosomal protein L6.
   
   0.947
ENSCAPP00000017536
annotation not available
   
   0.947
EEF1G
Eukaryotic translation elongation factor 1 gamma.
   
 
 0.944
RPL31
Ribosomal protein L31.
   
 
 0.942
RPL23
Ribosomal protein L23.
  
   0.941
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.