STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DDX21DExD-box helicase 21. (642 aa)    
Predicted Functional Partners:
ENSCAPP00000010582
annotation not available
   
 0.994
DHX9
DExH-box helicase 9.
  
 0.989
DDX50
DExD-box helicase 50.
   
   0.975
LARP7
La ribonucleoprotein 7, transcriptional regulator.
   
 0.975
MYO1C
Myosin IC.
    
  0.973
MYBBP1A
MYB binding protein 1a.
   
 0.970
SF3B1
Splicing factor 3b subunit 1.
   
 0.953
BAZ1B
Bromodomain adjacent to zinc finger domain 1B.
    
 0.945
DEK
DEK proto-oncogene.
   
 0.936
ERCC6
ERCC excision repair 6, chromatin remodeling factor.
  
 0.934
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.