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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATP2C2ATPase secretory pathway Ca2+ transporting 2. (928 aa)    
Predicted Functional Partners:
PLN
Phospholamban.
    
 0.849
ENSCAPP00000017316
annotation not available
    
 0.674
ATP2B1
ATPase plasma membrane Ca2+ transporting 1.
  
 
0.673
ATP2B4
ATPase plasma membrane Ca2+ transporting 4.
  
 
0.665
ATP2B2
ATPase plasma membrane Ca2+ transporting 2.
  
 
0.664
ATP2B3
ATPase plasma membrane Ca2+ transporting 3.
  
 
0.663
TMEM165
Transmembrane protein 165.
   
 
 0.611
ATP5F1A
ATP synthase F1 subunit alpha.
  
 
 0.605
ATP1B3
ATPase Na+/K+ transporting subunit beta 3.
    
 0.601
FXYD6
FXYD domain containing ion transport regulator 6.
    
  0.600
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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