STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MICAL2Microtubule associated monooxygenase, calponin and LIM domain containing 2. (1067 aa)    
Predicted Functional Partners:
ENSCAPP00000013152
annotation not available
 
    
 0.901
RAB10
RAB10, member RAS oncogene family.
    
 
 0.856
ARHGAP15
Rho GTPase activating protein 15.
    
   0.811
RAB1A
RAB1A, member RAS oncogene family.
    
 
 0.698
RAB1B
RAB1B, member RAS oncogene family.
    
 
 0.698
RAB8A
RAB8A, member RAS oncogene family.
    
 
 0.651
RAB8B
RAB8B, member RAS oncogene family.
    
 
 0.651
BCAP31
B cell receptor associated protein 31.
   
   0.628
KIF23
Kinesin family member 23.
    
 
 0.613
PLXNA4
Plexin A4.
    
 
 0.607
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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