Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PLEKHA5Pleckstrin homology domain containing A5. (1150 aa)    
Predicted Functional Partners:
ZMAT3
Zinc finger matrin-type 3.
    
 0.779
PLEKHA4
Pleckstrin homology domain containing A4.
    
 0.730
TCEA1
Transcription elongation factor A1.
    
 
 0.723
ADGRA1
Adhesion G protein-coupled receptor A1.
    
 
 0.690
ENSCAPP00000005634
annotation not available
    
 0.657
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.656
FRMD4B
FERM domain containing 4B.
    
 0.646
FRMD4A
FERM domain containing 4A.
    
 0.631
ENSCAPP00000012567
annotation not available
    
 0.631
ACTR10
Actin related protein 10.
    
 
 0.612
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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