Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ANKFN1Ankyrin repeat and fibronectin type III domain containing 1. (741 aa)    
Predicted Functional Partners:
ENSCAPP00000004558
annotation not available
      
 0.651
C17orf67
Chromosome 17 open reading frame 67.
      
 0.576
ENSCAPP00000011380
annotation not available
      
 0.569
CFAP57
Cilia and flagella associated protein 57.
      
 0.568
TTC26
Tetratricopeptide repeat domain 26.
      
 0.568
SAXO2
Stabilizer of axonemal microtubules 2.
      
 0.559
ZMYND12
Zinc finger MYND-type containing 12.
      
 0.528
GKN2
Gastrokine 2.
      
 0.518
B9D2
B9 domain containing 2.
      
 0.514
ENSCAPP00000015198
annotation not available
      
 0.513
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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