ENSCAPP00000003131 protein (Cavia aperea) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

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Experiments

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[Homology]

Score

ENSCAPP00000003131

annotation not available (270 aa)

Predicted Functional Partners:

COX10

0.998

SURF1

0.992

ENSCAPP00000006834

0.992

UQCRC1

0.978

ENSCAPP00000001665

0.972

UQCRC2

0.968

ENSCAPP00000000351

0.958

ENSCAPP00000012999

0.958

ENSCAPP00000008343

0.957

ENSCAPP00000012696

0.956

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
COX10	ENSCAPP00000000351	ENSCAPP00000008273	ENSCAPP00000000351	Cytochrome c oxidase assembly factor heme A:farnesyltransferase COX10.	annotation not available	0.955
COX10	ENSCAPP00000001665	ENSCAPP00000008273	ENSCAPP00000001665	Cytochrome c oxidase assembly factor heme A:farnesyltransferase COX10.	annotation not available	0.990
COX10	ENSCAPP00000003131	ENSCAPP00000008273	ENSCAPP00000003131	Cytochrome c oxidase assembly factor heme A:farnesyltransferase COX10.	annotation not available	0.998
COX10	ENSCAPP00000006834	ENSCAPP00000008273	ENSCAPP00000006834	Cytochrome c oxidase assembly factor heme A:farnesyltransferase COX10.	annotation not available	0.966
COX10	ENSCAPP00000008343	ENSCAPP00000008273	ENSCAPP00000008343	Cytochrome c oxidase assembly factor heme A:farnesyltransferase COX10.	annotation not available	0.957
COX10	ENSCAPP00000012696	ENSCAPP00000008273	ENSCAPP00000012696	Cytochrome c oxidase assembly factor heme A:farnesyltransferase COX10.	annotation not available	0.942
COX10	ENSCAPP00000012999	ENSCAPP00000008273	ENSCAPP00000012999	Cytochrome c oxidase assembly factor heme A:farnesyltransferase COX10.	annotation not available	0.964
COX10	SURF1	ENSCAPP00000008273	ENSCAPP00000005330	Cytochrome c oxidase assembly factor heme A:farnesyltransferase COX10.	SURF1 cytochrome c oxidase assembly factor.	0.915
COX10	UQCRC1	ENSCAPP00000008273	ENSCAPP00000006002	Cytochrome c oxidase assembly factor heme A:farnesyltransferase COX10.	Ubiquinol-cytochrome c reductase core protein 1.	0.934
COX10	UQCRC2	ENSCAPP00000008273	ENSCAPP00000007760	Cytochrome c oxidase assembly factor heme A:farnesyltransferase COX10.	Ubiquinol-cytochrome c reductase core protein 2.	0.946
ENSCAPP00000000351	COX10	ENSCAPP00000000351	ENSCAPP00000008273	annotation not available	Cytochrome c oxidase assembly factor heme A:farnesyltransferase COX10.	0.955
ENSCAPP00000000351	ENSCAPP00000001665	ENSCAPP00000000351	ENSCAPP00000001665	annotation not available	annotation not available	0.929
ENSCAPP00000000351	ENSCAPP00000003131	ENSCAPP00000000351	ENSCAPP00000003131	annotation not available	annotation not available	0.958
ENSCAPP00000000351	ENSCAPP00000006834	ENSCAPP00000000351	ENSCAPP00000006834	annotation not available	annotation not available	0.998
ENSCAPP00000000351	ENSCAPP00000008343	ENSCAPP00000000351	ENSCAPP00000008343	annotation not available	annotation not available	0.999
ENSCAPP00000000351	ENSCAPP00000012696	ENSCAPP00000000351	ENSCAPP00000012696	annotation not available	annotation not available	0.999
ENSCAPP00000000351	ENSCAPP00000012999	ENSCAPP00000000351	ENSCAPP00000012999	annotation not available	annotation not available	0.999
ENSCAPP00000000351	SURF1	ENSCAPP00000000351	ENSCAPP00000005330	annotation not available	SURF1 cytochrome c oxidase assembly factor.	0.782
ENSCAPP00000000351	UQCRC1	ENSCAPP00000000351	ENSCAPP00000006002	annotation not available	Ubiquinol-cytochrome c reductase core protein 1.	0.992
ENSCAPP00000000351	UQCRC2	ENSCAPP00000000351	ENSCAPP00000007760	annotation not available	Ubiquinol-cytochrome c reductase core protein 2.	0.997