Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMEM218Transmembrane protein 218. (115 aa)    
Predicted Functional Partners:
TMEM17
Transmembrane protein 17.
   
  
 0.699
MFRP
Membrane frizzled-related protein.
      
 0.676
LDLRAD1
Low density lipoprotein receptor class A domain containing 1.
    
   0.652
WBP1
WW domain binding protein 1.
      
 0.576
OGFOD2
2-oxoglutarate and iron dependent oxygenase domain containing 2.
      
 0.575
TMEM67
Transmembrane protein 67.
      
 0.571
TMEM237
Transmembrane protein 237.
      
 0.570
TMEM216
Transmembrane protein 216.
      
 0.570
TMEM231
Transmembrane protein 231.
      
 0.569
ENSCAPP00000005195
annotation not available
      
 0.543
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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