STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRAF3IP1TRAF3 interacting protein 1. (562 aa)    
Predicted Functional Partners:
IFT57
Intraflagellar transport 57.
    
 0.997
CLUAP1
Clusterin associated protein 1.
    
 0.997
ENSCAPP00000008760
annotation not available
    
 0.996
IFT172
Intraflagellar transport 172.
    
 0.994
IFT81
Intraflagellar transport 81.
    
 0.993
IFT88
Intraflagellar transport 88.
   
 0.991
IFT46
Intraflagellar transport 46.
    
 0.991
ENSCAPP00000016241
annotation not available
    
 0.991
TTC26
Tetratricopeptide repeat domain 26.
    
 0.986
ENSCAPP00000002289
annotation not available
    
 0.982
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.