STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZFP36L1ZFP36 ring finger protein like 1. (339 aa)    
Predicted Functional Partners:
CNOT8
CCR4-NOT transcription complex subunit 8.
    
 0.970
CNOT7
CCR4-NOT transcription complex subunit 7.
    
 0.969
ENSCAPP00000005548
annotation not available
    
 0.963
ENSCAPP00000012294
annotation not available
    
 0.963
CNOT6
CCR4-NOT transcription complex subunit 6.
    
 0.958
CNOT4
CCR4-NOT transcription complex subunit 4.
    
 0.958
CNOT3
CCR4-NOT transcription complex subunit 3.
    
 0.957
ENSCAPP00000009291
annotation not available
    
 0.956
CNOT2
CCR4-NOT transcription complex subunit 2.
    
 0.950
DICER1
Dicer 1, ribonuclease III.
    
 0.948
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.