STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LIN9Lin-9 DREAM MuvB core complex component. (519 aa)    
Predicted Functional Partners:
LIN37
Lin-37 DREAM MuvB core complex component.
    
 0.997
MYBL2
MYB proto-oncogene like 2.
    
 0.993
LIN54
Lin-54 DREAM MuvB core complex component.
   
 0.978
TESMIN
Testis expressed metallothionein like protein.
   
 0.973
MYBL1
MYB proto-oncogene like 1.
    
 0.940
MYB
MYB proto-oncogene, transcription factor.
    
 0.940
TFDP2
Transcription factor Dp-2.
   
 0.933
TFDP1
Transcription factor Dp-1.
   
 0.932
RBL2
RB transcriptional corepressor like 2.
   
 0.926
ENSCAPP00000001714
annotation not available
    
 0.922
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.