STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BPIFB4BPI fold containing family B member 4. (462 aa)    
Predicted Functional Partners:
LY86
Lymphocyte antigen 86.
      
 0.754
GPNMB
Glycoprotein nmb.
   
  
 0.706
BPIFB2
BPI fold containing family B member 2.
     
 0.666
ENSCAPP00000011380
annotation not available
      
 0.622
ENSCAPP00000012441
annotation not available
      
 0.613
CSMD2
CUB and Sushi multiple domains 2.
     
 0.600
BPIFB6
BPI fold containing family B member 6.
  
 
0.597
ADGRF3
Adhesion G protein-coupled receptor F3.
      
 0.583
APOB
Apolipoprotein B.
     
 0.531
ENSCAPP00000017899
annotation not available
     
 0.514
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.