STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRR3Proline rich 3. (131 aa)    
Predicted Functional Partners:
U2AF2
U2 small nuclear RNA auxiliary factor 2.
   
 0.991
ENSCAPP00000009270
annotation not available
   
 0.985
SF3A1
Splicing factor 3a subunit 1.
   
 0.971
ENSCAPP00000001654
annotation not available
   
 0.967
SF3A3
Splicing factor 3a subunit 3.
   
 0.934
CDC5L
Cell division cycle 5 like.
   
 
 0.921
SF3B1
Splicing factor 3b subunit 1.
   
 0.916
ENSCAPP00000017855
annotation not available
    
 0.912
PRPF39
pre-mRNA processing factor 39.
   
 0.911
ENSCAPP00000017572
annotation not available
   
 0.911
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.