STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMABMetabolism of cobalamin associated B. (240 aa)    
Predicted Functional Partners:
ENSCAPP00000000390
annotation not available
    
 0.842
ENSCAPP00000015411
annotation not available
  
 
 0.677
EPRS1
glutamyl-prolyl-tRNA synthetase 1.
     
 0.618
ENSCAPP00000016582
annotation not available
     
 0.609
UROS
Uroporphyrinogen III synthase.
     
 0.602
MMACHC
Metabolism of cobalamin associated C.
     
 0.570
MMAA
Metabolism of cobalamin associated A.
      
 0.569
MCEE
methylmalonyl-CoA epimerase.
     
 0.569
MMUT
methylmalonyl-CoA mutase.
      
 0.568
MMADHC
Metabolism of cobalamin associated D.
      
 0.567
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.