Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000003161annotation not available (380 aa)    
Predicted Functional Partners:
AGO2
Argonaute RISC catalytic component 2.
   
   0.789
ENSCAPP00000006136
annotation not available
   
 
 0.710
ATM
ATM serine/threonine kinase.
   
 
 0.709
CREB1
cAMP responsive element binding protein 1.
      
 0.682
ENSCAPP00000012700
annotation not available
      
 0.676
WWP2
WW domain containing E3 ubiquitin protein ligase 2.
      
 0.669
CALML3
Calmodulin like 3.
     
 0.626
ENSCAPP00000009980
annotation not available
      
 0.624
TAX1BP3
Tax1 binding protein 3.
      
 0.613
VEGFC
Vascular endothelial growth factor C.
    
 
 0.598
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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