Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000003166annotation not available (432 aa)    
Predicted Functional Partners:
ENSCAPP00000003704
annotation not available
   
  
 0.700
ACTR8
Actin related protein 8.
    
 0.684
ENSCAPP00000013082
annotation not available
    
 0.679
ACTL6A
Actin like 6A.
   
 0.669
ENSCAPP00000017006
annotation not available
    
 0.660
ENSCAPP00000013704
annotation not available
     
 0.650
RUVBL2
RuvB like AAA ATPase 2.
   
 0.634
ASB15
Ankyrin repeat and SOCS box containing 15.
    
 0.616
ERCC3
ERCC excision repair 3, TFIIH core complex helicase subunit.
    
 0.607
RUVBL1
RuvB like AAA ATPase 1.
    
 0.605
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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