STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000003172annotation not available (142 aa)    
Predicted Functional Partners:
PNISR
PNN interacting serine and arginine rich protein.
   
  0.773
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.753
MSL2
MSL complex subunit 2.
    
 0.753
ENSCAPP00000012100
annotation not available
    
 0.746
ENSCAPP00000016425
annotation not available
    
 0.746
NXF1
Nuclear RNA export factor 1.
    
 0.722
ENSCAPP00000011839
annotation not available
    
 0.722
ENSCAPP00000002444
annotation not available
    
 0.681
ENSCAPP00000013438
annotation not available
    
 0.681
ENSCAPP00000017572
annotation not available
   
 
 0.668
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.